Streamlining the discovery of biomarkers with cytometry data
Cytofit is a SaaS under development, that aim to simplify the workflows of mass cytometry analysis. Supporting flow cytometry is on our roadmap, and we would like to get in touch with future users.
Sounds interesting? Follow our newsletter for more information.
Satisfied
Customers
Developed with experts in the field of cytometry.
Strong Synergies with Flow Cytometry
Planned Features
The Cytofit software is under development, based on successful preliminary pilots with respectful institutions.
When launched, you will experience assisted preprocessing of data, semi-automated workflows and a user friendly design.
We are working on implementing the following features specifically for mass cytometry, but optimising our solution to also support flow cytometry is on our development roadmap.
Data
Storage
Upload FCS files or set up a data pipeline to automate data input seamlessly.
Feature
Extraction
Compute biologically, meaningful metrics likes relative abundances and functional marker expression.
Data
Cleaning
Ensure data comparability with automated quality control, compensation, normalization, and transformation methods.
Predictive
Modeling
More patient data over time will enable opportunities to implement AI models to improve gating strategies and endpoints.
Assisted
Gating
Assisted and simplified setup of gating strategies for flow cytometry data ,based on biomarker data distributions.
Advanced
Analysis
Single-time-point or differential analysis between conditions. Explore data with
dimensionality reduction.
Subpopulation
Clustering
Cluster events into biologically-relevant cell subpopulations, offering hard/soft clustering and scoring functions to match preset phenotypes.
Report
Generation
Automatically build transparent reports that summarise the workflow. Quickly share your findings with others.
Streamline the workflow in a secure environment
Cytofit will be designed to ensure a secure way of storing and treating patient data. Uploaded data will be anonymised and stored in a secure cloud environment to ensure patient confidentiality.
We are aiming to enable medical insights in a simple and secure way with our end-to-end solution for mass cytometry analysis.
Secure and Flexible Cloud Platform
Pricing
As we are currently refining our Flow Cytometry services, all pricing is available upon request. Please contact us to discuss how Cytofit can support your Flow Cytometry data analysis needs.
Our Story
Reinventing the
Workflow
Cytofit is a cloud-based SaaS solution under development that contains all essential mass cytometry data processing tools. Our software will be designed to streamline the workflow from data collection to clinical application in the context of translational precision medicine. We are currently identifying and mapping the features required to also support flow cytometry analysis when we have sufficient demand from relevant users.
Cytofit is being developed by experts from Expert Analytics AS, in combination with field experts in mass and flow cytometry.
How it Works
/01
Analysing the
Data
Use Cytofit as an all-in-one solution for preprocessing, gating and analysing of mass cytometry data, and soon also for flow cytometry data. Upload your data and find relevant information and insights within our advanced analysing tool.
/02
Cloud Based
Technology
Cytofit will be a SaaS solution for bioinformaticians that is looking for the best software to save time on manual gating and analysing cytometry data.
Are you working with flow cytometry? We'd love to hear from you.
Your insights are invaluable in shaping the functionality of Cytofit.
Our Mission
Cytofit’s design is being built on four core principles: Integration, automation, analysis and visualisation. Improving these four aspects will allow stronger collaborations between clinical laboratories, industry, healthcare professionals and researchers.
Integration
Cytofit will be a unified framework to store, preprocess, analyse and visualise the data. This integrated pipeline accounts for the needs of the different specialists involved at the various stages of cytometry data processing. The streamlining of the workflow in turn improves the information flow between all experts and institutions involved.
Automation
Cytofit will automate repetitive tasks and minimise subjective user input. By standardising the data processing workflow, our tool will provide users with robust results comparable across different datasets and scientific publications. Therefore, we will increase the comparability of various types of cytometry data and allow for more impactful conclusions to be drawn.
Analysis
Cytofit will include a range of adjustable analysis models from basic linear regressions to advanced statistical models. Such analysis models are used for biomarker discovery and to provide increased insights on patients’ responses to treatments. The analysis features will have an intuitive and transparent interface so non-experts can interpret the output.
Visualization
Cytofit will generate high-quality visualisations. These will include interactive figures that enable intuitive data exploration, helping detect hidden, clinically relevant correlations within and between experiments. We will leverage dimensionality reduction algorithms to visualise the mass cytometry data. This functionality will be built with a user-friendly interface with an intuitive user guide.